Data quality metrics extracted from 4dli.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4DLI at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
90
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-05-08
Detector
_diffrn_detector.type
MARRESEARCH
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00000
Software
Data scaling #1
_software.classification
XSCALE (Wolfgang Kabsch)
Data scaling #2
_software.classification
XDS
Phasing
_software.classification
PHASER (1.3.1; 1 July 2005; Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
66.26 74.22 77.92 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
45.000 45.000 2.000
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.910 16.000 1.910
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.040 0.015 0.401
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 128 15594
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
30306 48 3870
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
21.98 48.52 3.99
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.5 67.6 99.8
Multiplicity
_reflns.pdbx_redundancy
4.0 - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4DLI
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-02-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
41.7 - 1.910 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2151 / 0.2546
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB entry 1ZYJ