Experiment | |
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Method _exptl.method | ELECTRON CRYSTALLOGRAPHY The method used in the experiment. |
Software | |
Data reduction _software.classification | XDS (Jun 30, 2023 BUILT=20230630) The classification of the program according to its |
Data scaling _software.classification | XSCALE (Jun 30, 2023 BUILT=20230630) The classification of the program according to its |
Phasing _software.classification | PHASER (2.8.3) The classification of the program according to its |
Refinement _software.classification | PHENIX (1.21.1_5286) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 2 21 21 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 31.24 Unit-cell length a corresponding to the structure reported in 57.87 Unit-cell length b corresponding to the structure reported in 59.06 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | NA |
Data quality metrics | Overall | InnerShell | OuterShell |
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Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 28.930 The largest value in angstroms for the interplanar spacings | 28.930 The highest value in angstroms for the interplanar spacings | 3.290 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 3.200 The smallest value in angstroms for the interplanar spacings | 13.950 The smallest value in angstroms for the interplanar spacings | 3.200 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.690 The R value for merging intensities satisfying the observed | 0.326 The value of Rmerge(I) for reflections classified as 'observed' | 4.130 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all | 0.719 The redundancy-independent merging R factor value Rrim, | 0.353 The redundancy-independent merging R factor value Rrim, | 4.290 The redundancy-independent merging R factor value Rrim, |
Rpim | - | - | - |
Total number of observations _reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs | 24817 Total number of measured reflections. | 207 The number of reflections classified as 'observed' | 2031 The number of reflections classified as 'observed' |
Total number unique _reflns.number_obs _reflns_shell.number_unique_obs | 1912 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 30 The total number of measured reflections classified as 'observed' | 150 The total number of measured reflections classified as 'observed' |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs | 3.20 The mean of the ratio of the intensities to their | 4.14 The mean of the ratio of the intensities to their | 0.81 The mean of the ratio of the intensities to their |
Completeness [%] _reflns.percent_possible_obs | 96.1 The percentage of geometrically possible reflections represented | - | - |
Multiplicity | - | - | - |
CC(1/2) _reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half | 0.931 The Pearson's correlation coefficient expressed as a decimal value | 0.969 The Pearson's correlation coefficient expressed as a decimal value | 0.559 The Pearson's correlation coefficient expressed as a decimal value |
Refinement | |
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PDB entry ID _entry.id | 9DKZ |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2024-09-10 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 28.9 - 3.200 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.2679 / 0.3110 |