Data quality metrics extracted from 3dkw.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3DKW at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2008-06-03
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.972
Software
Data collection
_software.classification
DNA
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.2.0019)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
245.282 121.466 82.554 90.00 97.53 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97200 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
100.000
High resolution limit [Å]
_reflns.d_resolution_high
3.600
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.170
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
27033
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.70
Completeness [%]
_reflns.percent_possible_obs
96.9
Multiplicity
_reflns.pdbx_redundancy
2.7
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
3DKW
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-06-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
100.0 - 3.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.3257 / 0.3743
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2Z69