Data quality metrics extracted from 2dh4.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2DH4 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSRRC BEAMLINE BL17B2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSRRC
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL17B2
Temperature [K]
_diffrn.ambient_temp
100.0
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2005-03-21
Detector
_diffrn_detector.type
MAR scanner 345 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1274
Software
Data collection
_software.classification
HKL-2000
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
SOLVE
Refinement
_software.classification
CNS (1.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
48.747 116.331 129.768 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.033200.979900.979600.953701.12740 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.050
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.980 1.980
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.053 0.528
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
50750 5175
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
28.00 2.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.2 82.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.0 4.1
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2DH4
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2006-03-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.0 - 1.980 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1890 / 0.2430
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD with data collected on Se-Met crystal at 0.9796 A.