| Experiment | |
|---|---|
Method _exptl.method | X-RAY DIFFRACTION |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH |
Source type _diffrn_source.source | ROTATING ANODE |
Source details _diffrn_source.type | RIGAKU MICROMAX-007 HF |
Temperature [K] _diffrn.ambient_temp | 100 |
Detector technology _diffrn_detector.detector | CCD |
Collection date _diffrn_detector.pdbx_collection_date | 2017-01-29 |
Detector _diffrn_detector.type | RIGAKU SATURN 944 |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.54178 |
| Software | |
Data scaling _software.classification | HKL-3000 (703x) |
Phasing _software.classification | PHASER |
Model building _software.classification | Coot (0.8.8) |
Refinement _software.classification | PHENIX (1.12-2829) |
| General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 21 21 21 |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 51.211 57.980 62.167 90.0 90.0 90.0 |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.54178 Å |
| Data quality metrics | Overall | OuterShell |
|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 24.156 | 2.105 |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 1.954 | 1.954 |
| Rmerge | - | - |
| Rmeas | - | - |
| Rpim | - | - |
| Total number of observations | - | - |
Total number unique _reflns.number_obs | 13687 | - |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI | 12.60 | - |
Completeness [%] _reflns.percent_possible_obs | 98.0 | - |
Multiplicity _reflns.pdbx_redundancy | 6.5 | - |
| CC(1/2) | - | - |
| Refinement | |
|---|---|
PDB entry ID _entry.id | 6DGY |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2018-05-18 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 24.2 - 1.954 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1935 / 0.2276 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | 4LL3 |