Data quality metrics extracted from 5df6.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5DF6 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-06-19
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97929
Software
Data processing
_software.classification
HKL-3000
Data scaling #1
_software.classification
SCALEPACK
Data scaling #2
_software.classification
Aimless (0.5.14)
Phasing
_software.classification
PHASER
Model building
_software.classification
ARP
Refinement
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
28.470 72.166 62.547 90.00 101.77 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97929 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.690 1.820
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.780 1.780
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.076 0.526
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
23333 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.20 1.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.5 95.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.9 3.3
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5DF6
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-08-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.7 - 1.780 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1940 / 0.2480