Data quality metrics extracted from 6dd8.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6DD8 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-C
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-C
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-08-01
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9793
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing #1
_software.classification
Arcimboldo
Phasing #2
_software.classification
RESOLVE
Refinement
_software.classification
PHENIX (1.13_2998: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.810 49.396 150.264 90.0 90.8 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97930 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
150.000
High resolution limit [Å]
_reflns.d_resolution_high
2.600
  Rmerge -
Rmeas
_reflns.pdbx_Rrim_I_all
0.132
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
40144
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.78
Completeness [%]
_reflns.percent_possible_obs
98.7
Multiplicity
_reflns.pdbx_redundancy
3.5
CC(1/2)
_reflns.pdbx_CC_half
0.997

Refinement
PDB entry ID
_entry.id
6DD8
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-05-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.9 - 2.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2537 / 0.3230
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given