Data quality metrics extracted from 6db6.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6DB6 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS-II BEAMLINE 17-ID-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS-II
Beamline
_diffrn_source.pdbx_synchrotron_beamline
17-ID-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-11-28
Detector
_diffrn_detector.type
DECTRIS EIGER X 9M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.92010
Software
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Model building
_software.classification
Coot
Refinement
_software.classification
PHENIX (1.13_2998: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
46.568 69.157 141.887 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.92010 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
28.220 2.049
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.978 1.978
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.117 0.784
  Rmeas - -
  Rpim - -
Total number of observations
_reflns_shell.number_measured_obs
- 2060
Total number unique
_reflns.number_obs
32451 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.10 -
Completeness [%]
_reflns.percent_possible_obs
98.7 -
Multiplicity
_reflns.pdbx_redundancy
6.6 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6DB6
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-05-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
28.2 - 1.978 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1735 / 0.2164