Data quality metrics extracted from 5db7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5DB7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.3
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-04-19
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97648
Software
Data collection
_software.classification
StructureStudio
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.8.4_1496)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
54.396 79.480 54.912 90.00 105.36 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97648 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
20.000
High resolution limit [Å]
_reflns.d_resolution_high
2.220
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
22542
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
20.40
Completeness [%]
_reflns.percent_possible_obs
99.9
Multiplicity
_reflns.pdbx_redundancy
4.8
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5DB7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-08-21
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.9 - 2.209 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2207 / 0.2730