Data quality metrics extracted from 7d83.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7D83 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2013-04-05
Detector
_diffrn_detector.type
RIGAKU RAXIS IV++
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.5.0102)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 31 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
72.312 72.312 65.845 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.50000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
62.620 50.000 2.470
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.430 6.590 2.430
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.083 0.044 0.560
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
7819 432 366
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.80 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 98.6 96.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.5 6.0 5.6
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
7D83
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-10-07
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
62.6 - 2.430 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2239 / 0.2779
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6LMQ