Data quality metrics extracted from 4d8b.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4D8B at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2011-02-14
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97945
Software
Data reduction #1
_software.classification
MOSFLM
Data reduction #2
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
SOLVE
Refinement
_software.classification
PHENIX (phenix.refine: 1.7.3_928)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
114.994 50.112 41.887 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97945 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
19.679 1.120 1.080
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.058 1.100 1.058
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.070 0.458 0.592
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
111095 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
33.60 3.30 2.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.4 94.5 83.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.2 4.2 4.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4D8B
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-01-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.7 - 1.058 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1443 / 0.1601
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given