Data quality metrics extracted from 4d5e.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4D5E at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06DA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06DA
Temperature [K]
_diffrn.ambient_temp
287
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-02-14
Detector
_diffrn_detector.type
DECTRIS PILATUS 2M-F
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA
Refinement
_software.classification
REFMAC (5.8.0069)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
123.188 123.188 143.070 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
47.690
High resolution limit [Å]
_reflns.d_resolution_high
1.430
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.100
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
201517
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
16.10
Completeness [%]
_reflns.percent_possible_obs
100.0
Multiplicity
_reflns.pdbx_redundancy
10.0
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4D5E
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-11-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.7 - 1.430 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1220 / 0.1473
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given