Data quality metrics extracted from 2d4i.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2D4I at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
MACSCIENCE
Temperature [K]
_diffrn.ambient_temp
290.0
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2004-05-07
Detector
_diffrn_detector.type
BRUKER SMART 6000
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction #1
_software.classification
SaintPlus
Data reduction #2
_software.classification
SMART (V. 6000)
Data scaling
_software.classification
SAINTPLUS
Phasing
_software.classification
X-PLOR
Model building
_software.classification
X-PLOR
Refinement
_software.classification
SHELXL-97
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
28.008 62.915 60.494 90.00 90.55 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
17.200 1.170
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.130 1.130
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.067 0.415
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
68963 -
  <I/σ(I)> - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
88.7 57.3
Multiplicity
_reflns.pdbx_redundancy
2.4 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2D4I
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2005-10-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
17.2 - 1.160 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1360 / 0.1750
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1LJ4