Data quality metrics extracted from 2d3m.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2D3M at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL24XU
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL24XU
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2004-10-07
Detector
_diffrn_detector.type
RIGAKU RAXIS V
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.82656
Software
Refinement
_software.classification
CNS (1.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
73.15 88.40 70.04 90.00 95.58 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.82656 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
30.000
High resolution limit [Å]
_reflns.d_resolution_high
1.600
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
116521
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
99.7
  Multiplicity -
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
2D3M
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2005-09-29
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.0 - 1.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1980 / 0.2070
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given