Data quality metrics extracted from 6d2k.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6D2K at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-02-19
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97935
Software
Data collection
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX
Model building
_software.classification
Coot
Refinement
_software.classification
PHENIX (1.5_2)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
39.418 72.762 94.226 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97935 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
36.380
High resolution limit [Å]
_reflns.d_resolution_high
1.550
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
37895
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
34.02
Completeness [%]
_reflns.percent_possible_obs
99.7
Multiplicity
_reflns.pdbx_redundancy
5.4
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
6D2K
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-04-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
36.4 - 1.550 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1966 / 0.2242
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2HE7