Data quality metrics extracted from 6d18.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6D18 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 8.3.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
8.3.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-01-29
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1158
Software
Data reduction
_software.classification
iMOSFLM (7.2.1)
Data scaling
_software.classification
SCALA (3.3.22)
Phasing
_software.classification
PHASER (2.8.0)
Refinement
_software.classification
PHENIX (1.13_2998)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 2 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
56.61 59.68 77.69 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.11580 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.330 47.330 1.420
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.350 4.270 1.350
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.045 0.023 0.304
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.053 0.040 0.027
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.027 0.021 0.013
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
57830 1926 7892
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
14.70 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.9 95.2 94.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.8 3.7 2.8
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.999 0.937

Refinement
PDB entry ID
_entry.id
6D18
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-04-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.0 - 1.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1466 / 0.1740
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5UL8