Data quality metrics extracted from 6d0g.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6D0G at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-F
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-F
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2018-02-06
Detector
_diffrn_detector.type
RAYONIX MX-300
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97872
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
HKL-3000
Refinement
_software.classification
REFMAC (5.8.0189)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
41.883 73.616 202.741 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97872 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 1.810
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.780 1.780
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.095 0.755
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.098 0.790
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.026 0.223
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
29760 1272
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
29.30 3.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.2 85.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.3 11.7
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.773

Refinement
PDB entry ID
_entry.id
6D0G
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-04-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.8 - 1.780 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1744 / 0.2101
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD