Data quality metrics extracted from 4d0d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4D0D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04
Temperature [K]
_diffrn.ambient_temp
100
Collection date
_diffrn_detector.pdbx_collection_date
2011-12-10
Software
Data reduction
_software.classification
XDS (THROUGH XIA2)
Data scaling
_software.classification
Aimless (THROUGH XIA2)
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.11.4)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
88.08 92.54 223.63 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
88.080 3.210
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.130 3.130
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.180 0.690
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
32916 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.80 2.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.6 98.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.6 4.4
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
4D0D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-04-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
82.0 - 3.130 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2925 / 0.2986
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 2YF6