Data quality metrics extracted from 6czd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6CZD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-08-04
Detector
_diffrn_detector.type
ADSC QUANTUM 210r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9537
Software
Data reduction
_software.classification
MOSFLM (Andrew G.W. Leslie; andrew@mrc-lmb.cam.ac.uk)
Data scaling
_software.classification
Aimless (0.5.32; 29/03/17; Phil Evans)
Phasing
_software.classification
PHASER (Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
PHENIX (Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
54.77 105.75 155.20 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95370 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
51.650 51.650 2.490
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 8.980 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.097 0.039 0.280
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.101 0.041 0.291
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.029 0.012 0.079
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
33692 769 2924
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
18.50 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
93.4 98.5 78.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
10.9 11.4 11.6
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.999 0.986

Refinement
PDB entry ID
_entry.id
6CZD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-04-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.7 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1893 / 0.2588
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given