Data quality metrics extracted from 5cuy.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5CUY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSRRC BEAMLINE BL13C1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSRRC
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL13C1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-11-22
Detector
_diffrn_detector.type
RAYONIX MX300HE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97622
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
CNS (1.2)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
199.917 70.137 141.759 90.00 106.38 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97622 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
25.000 25.000 2.590
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.500 5.370 2.500
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.090 0.057 0.383
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.108 0.068 0.458
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.058 0.037 0.249
Total number of observations
_reflns.pdbx_number_measured_all
216422 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
64763 6655 6191
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.8 98.7 94.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.3 3.3 3.1
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.994 0.896

Refinement
PDB entry ID
_entry.id
5CUY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-07-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
25.0 - 2.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1941 / 0.2515
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5CUV