Data quality metrics extracted from 3csy.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3CSY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2006-08-23
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.98030
Software
Data collection
_software.classification
BOS
Data reduction
_software.classification
d*TREK
Data scaling
_software.classification
d*TREK (9.6D; Mar 15 2006; Pflugrath, J.W.; jwp@RigakuMSC.com)
Phasing #1
_software.classification
PHASER (R. J. Read; cimr-phaser@lists.cam.ac.uk)
Phasing #2
_software.classification
DM (K. Cowtan; ccp4@dl.ac.uk)
Phasing #3
_software.classification
SHARP
Refinement
_software.classification
PHENIX (P.D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
273.71 273.71 409.43 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98030 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
48.370 48.370 3.520
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.400 7.320 3.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.142 0.047 0.568
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 76813 54223
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
151305 15253 14867
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
6.20 18.50 1.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.2 96.8 94.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.1 4.9 3.6
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3CSY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-04-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.4 - 3.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2610 / 0.3020
Structure solution method
_refine.pdbx_method_to_determine_struct
phase combination of model phases from an independently solved Fab KZ52 and Fab KZ52 selenium anomalous signal