Data quality metrics extracted from 3cr4.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3CR4 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2005-08-05
Detector
_diffrn_detector.type
RIGAKU RAXIS IV++
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data collection
_software.classification
CrystalClear
Data reduction
_software.classification
DENZO (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Phasing
_software.classification
MOLREP (A. Vagin; alexei@ysbl.york.ac.uk)
Refinement
_software.classification
REFMAC (Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
63.587 63.587 48.248 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.230
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.150 4.630 2.150
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.081 0.031 0.666
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
5795 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
12.0 11.0 12.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3CR4
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-04-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
45.0 - 2.150 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2086 / 0.2660
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given