Data quality metrics extracted from 5cmq.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5CMQ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL12-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL12-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-04-04
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.98
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA
Phasing
_software.classification
MOLREP
Model building
_software.classification
Coot
Refinement
_software.classification
REFMAC (5.8.0123)
General information
Spacegroup name
_symmetry.space_group_name_H-M
F 4 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
180.21 180.21 180.21 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
104.044 31.857 2.040
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.935 6.120 1.930
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.097 0.039 0.328
Rmeas
_reflns.pdbx_Rrim_I_all
0.101 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.027 0.011 0.090
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
242003 8814 32906
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
17713 718 2312
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
19.20 14.60 7.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
91.7 99.1 84.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.7 12.3 14.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5CMQ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-07-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
104.0 - 1.935 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1408 / 0.1802
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2CEI