Data quality metrics extracted from 6cka.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6CKA at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-D
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-06-13
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979498
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing #1
_software.classification
CRANK2
Phasing #2
_software.classification
PHENIX
Model building #1
_software.classification
Coot
Model building #2
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.10.1_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 2 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
26.689 56.816 88.372 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 1.650
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.559 1.559
  Rmerge - -
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.114 0.616
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
19842 3119
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.60 -
Completeness [%]
_reflns.percent_possible_obs
99.2 -
Multiplicity
_reflns.pdbx_redundancy
11.6 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.682

Refinement
PDB entry ID
_entry.id
6CKA
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-02-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.8 - 1.559 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1623 / 0.1835
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD