Data quality metrics extracted from 6cii.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6CII at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SEALED TUBE
Source details
_diffrn_source.type
OTHER
Temperature [K]
_diffrn.ambient_temp
110
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-11-10
Detector
_diffrn_detector.type
AGILENT ATLAS CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data reduction
_software.classification
CrysalisPro (1.171.36.32)
Data scaling
_software.classification
CrysalisPro (1.171.36.32)
Phasing
_software.classification
PHENIX (1.13rc1_2954)
Model building
_software.classification
Coot (0.8.8)
Refinement
_software.classification
PHENIX (1.13rc1_2954: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.992 45.992 121.277 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
21.502 1.760
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.700
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.042 0.192
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.044 0.214
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.013 0.093
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
27344 2732
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
36.06 5.88
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.2 5.0
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6CII
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-02-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
21.5 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1632 / 0.1905
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD