Data quality metrics extracted from 5cg2.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5CG2 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL12-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL12-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-06-20
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97950
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA (3.3.20)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.6.0117)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
79.913 79.913 323.789 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
69.210 39.656 2.230
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.110 6.680 2.110
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.048 0.032 0.115
Rmeas
_reflns.pdbx_Rrim_I_all
0.049 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.012 0.008 0.030
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
624835 20988 69022
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
36240 1371 4921
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
42.60 16.20 6.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.3 99.5 95.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
17.2 15.3 14.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5CG2
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-07-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
69.2 - 2.110 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2019 / 0.2413
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5CFZ