Data quality metrics extracted from 6cfy.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6CFY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 8.3.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
8.3.1
Temperature [K]
_diffrn.ambient_temp
273
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-12-16
Detector
_diffrn_detector.type
DECTRIS PILATUS3 S 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA
Phasing
_software.classification
AutoSol
Refinement
_software.classification
PHENIX (1.6.4_486)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
39.589 39.589 205.125 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
38.870 2.530
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 2.400
Rmerge
_reflns.pdbx_Rsym_value
0.099 -
Rmeas
_reflns.pdbx_Rrim_I_all
0.122 -
Rpim
_reflns.pdbx_Rpim_I_all
0.041 -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
12187 1213
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.20 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.9
Multiplicity
_reflns.pdbx_redundancy
19.1 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.319

Refinement
PDB entry ID
_entry.id
6CFY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-02-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.8 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2310 / 0.2659
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD