Data quality metrics extracted from 8c9l.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8C9L at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PETRA III, DESY BEAMLINE P11
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
PETRA III, DESY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
P11
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2022-08-23
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0332
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
REFMAC
Refinement
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
114.074 53.694 44.707 90.000 102.049 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
1.03320 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
48.380 1.760
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.700
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
28802 2771
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
16.97 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.6 96.3
Multiplicity
_reflns.pdbx_redundancy
5.0 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.550

Refinement
PDB entry ID
_entry.id
8C9L
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-01-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.4 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2069 / 0.2440
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6y2e