Data quality metrics extracted from 5c9e.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5C9E at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-02-21
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.92023
Software
Data reduction
_software.classification
xia2
Data scaling
_software.classification
Aimless (0.3.5)
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER-TNT (BUSTER 2.10.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
84.32 84.32 238.96 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.92023 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
84.320 84.320 3.430
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.210 9.080 3.210
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.118 0.029 0.818
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.028 0.007 0.191
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
275631 12134 50201
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
14926 794 2621
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
23.10 77.70 4.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 100.0 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
18.5 15.3 19.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 1.000 0.960

Refinement
PDB entry ID
_entry.id
5C9E
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-06-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
79.5 - 3.210 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2105 / 0.2562