Data quality metrics extracted from 6c84.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6C84 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-D
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-04-25
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9870
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.12_2829)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
110.977 73.071 131.445 90.00 114.97 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98700 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 2.550
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.510 6.790 2.510
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.096 0.040 0.829
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.112 0.047 0.967
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.057 0.025 0.495
Total number of observations
_reflns.pdbx_number_measured_all
246829 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
65301 3389 3220
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.6 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.8 3.5 3.8
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.997 0.749

Refinement
PDB entry ID
_entry.id
6C84
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-01-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.8 - 2.511 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2238 / 0.2650