Data quality metrics extracted from 5c80.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5C80 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-05-16
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97989
Software
Data scaling
_software.classification
SCALA (3.3.22)
Phasing
_software.classification
PHASER (2.5.7)
Refinement
_software.classification
REFMAC (5.7.0032)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
61.255 73.110 83.137 71.81 77.19 85.69
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97989 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
77.231 45.427 2.360
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.243 7.090 2.243
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.055 0.026 0.333
Rmeas
_reflns.pdbx_Rrim_I_all
0.077 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.055 0.026 0.333
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
101646 3195 13271
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
58293 1867 7810
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.60 19.00 2.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
91.1 92.3 83.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
1.7 1.7 1.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5C80
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-06-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
45.5 - 2.243 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1683 / 0.2370
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4LWZ