Data quality metrics extracted from 5c50.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5C50 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 8.3.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
8.3.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-04-18
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.07207
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
SHELXDE
Model building #1
_software.classification
Coot
Model building #2
_software.classification
ARP
Refinement
_software.classification
PHENIX (dev_1819)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
67.722 64.447 94.120 90.00 97.54 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.07207 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.690
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.630 3.510 1.630
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.092 0.076 0.486
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.099 0.082 0.562
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.037 0.030 0.278
Total number of observations
_reflns.pdbx_number_measured_all
263036 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
49908 5111 4942
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
20.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 100.0 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.3 8.0 3.9
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.995 0.872

Refinement
PDB entry ID
_entry.id
5C50
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-06-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.7 - 1.630 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1761 / 0.1946
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD