Data quality metrics extracted from 2c5d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2C5D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-1
Temperature [K]
_diffrn.ambient_temp
100.0
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-03-11
Detector
_diffrn_detector.type
MARRESEARCH
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement
_software.classification
CNS (1.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
292.951 292.951 63.951 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97940 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
20.000
High resolution limit [Å]
_reflns.d_resolution_high
3.300
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.120
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
47655
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.30
Completeness [%]
_reflns.percent_possible_obs
99.5
Multiplicity
_reflns.pdbx_redundancy
5.9
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
2C5D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2005-10-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 3.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2409 / 0.2653
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRIES 1H30 AND 1RHF