Data quality metrics extracted from 8c4q.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8C4Q at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
PETRA III, EMBL c/o DESY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
P14 (MX2)
Temperature [K]
_diffrn.ambient_temp
180
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2022-10-10
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.6888
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.20.1-4487)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
42.70 64.52 129.48 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.68880 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.430
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.380 17.000 1.380
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.048 0.029 4.623
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.050 0.031 4.828
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
72378 47 6764
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
18.63 - -
Completeness [%]
_reflns.percent_possible_obs
97.1 - -
Multiplicity
_reflns.pdbx_redundancy
8.0 - -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 1.000 0.354

Refinement
PDB entry ID
_entry.id
8C4Q
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-01-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
35.9 - 1.450 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1897 / 0.2167
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS