Data quality metrics extracted from 6c2m.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6C2M at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-B
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-B
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-07-07
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0
Software
Data collection
_software.classification
HKL-3000
Data processing
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000 (703x)
Phasing
_software.classification
PHASER
Model building
_software.classification
Coot (0.8.8)
Refinement
_software.classification
PHENIX (1.12_2829: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
56.635 103.326 73.962 90.00 112.01 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
35.725 1.906
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.859 1.859
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.pdbx_Rsym_value
0.066 0.281
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
63506 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.40 -
Completeness [%]
_reflns.percent_possible_obs
96.0 -
Multiplicity
_reflns.pdbx_redundancy
3.3 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6C2M
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-01-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
35.7 - 1.859 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1805 / 0.2242
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5VOJ