Data quality metrics extracted from 3bwv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3BWV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2007-12-09
Detector
_diffrn_detector.type
MARMOSAIC 325 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91837, 0.97908, 0.97959
Software
Data collection
_software.classification
MAR345 (CCD)
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing
_software.classification
SOLVE (Tom Terwilliger; terwilliger@LANL.gov)
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement #1
_software.classification
REFMAC (5.4.0066; Murshudov, G.N.; ccp4@dl.ac.uk)
Refinement #2
_software.classification
PHENIX (P.D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
39.31 40.27 55.31 71.93 75.08 83.62
Wavelength
_diffrn_radiation_wavelength.wavelength
0.918370.979080.97959 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.235 29.235 1.600
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.540 3.310 1.540
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.067 0.045 0.529
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 6650 6168
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
43195 8811 7578
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
4.92 10.40 1.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
92.8 94.7 75.2
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3BWV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-01-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.2 - 1.550 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1820 / 0.2230
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD