Data quality metrics extracted from 5buu.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5BUU at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
MAX II BEAMLINE I911-3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
MAX II
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I911-3
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-10-12
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9100
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
99.209 122.270 47.652 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.652 47.652 2.180
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.070 6.550 2.070
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.057 0.030 0.332
Rmeas
_reflns.pdbx_Rrim_I_all
0.065 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.032 0.019 0.180
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
147486 4640 21375
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
36199 1282 5184
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.90 10.80 2.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.6 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.1 3.6 4.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5BUU
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-06-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.7 - 2.070 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2037 / 0.2499
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3tkd, molA