Data quality metrics extracted from 5bq9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5BQ9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-11-27
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97918
Software
Data collection
_software.classification
SBC-Collect
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
HKL-3000
Model building
_software.classification
Coot
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
74.439 76.625 76.688 90.00 96.66 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97918 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.340
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.278 6.240 2.278
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.095 0.036 0.861
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.103 0.039 0.936
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.039 0.015 0.363
Total number of observations
_reflns.pdbx_number_measured_all
265782 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
38820 2004 1928
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.6 99.0 98.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.8 6.8 6.5
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.996 0.839

Refinement
PDB entry ID
_entry.id
5BQ9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-05-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.4 - 2.279 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1800 / 0.2263
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD