Data quality metrics extracted from 5bpt.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5BPT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I24
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I24
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-05-01
Detector
_diffrn_detector.type
ADSC QUANTUM 4
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.969
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA
Phasing
_software.classification
SHARP
Refinement #1
_software.classification
BUSTER-TNT (2.10.1)
Refinement #2
_software.classification
BUSTER (2.11.4)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
90.469 90.469 115.593 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96900 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
29.300
High resolution limit [Å]
_reflns.d_resolution_high
3.200
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.200
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
15477
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.30
Completeness [%]
_reflns.percent_possible_obs
99.8
Multiplicity
_reflns.pdbx_redundancy
7.5
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5BPT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-05-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.7 - 3.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2227 / 0.2653
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD