Data quality metrics extracted from 3bpj.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3BPJ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU FR-E
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2007-12-14
Detector
_diffrn_detector.type
RIGAKU RAXIS
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction
_software.classification
DENZO (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Phasing #1
_software.classification
SHELX (George Sheldrick; gsheldr@shelx.uni-ac.gwdg.de)
Phasing #2
_software.classification
RESOLVE (Terwilliger, T. C; terwilliger@LANL.gov)
Phasing #3
_software.classification
SHELXD
Refinement
_software.classification
REFMAC (5.3.0037; Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
60.902 62.373 88.056 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 1.920
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.850 3.980 1.850
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.041 0.035 0.877
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
29322 3075 2876
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
24.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 98.1 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.3 6.9 7.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3BPJ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2007-12-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
25.0 - 1.850 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2290 / 0.2630
Structure solution method
_refine.pdbx_method_to_determine_struct
SIRAS