Data quality metrics extracted from 5bob.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5BOB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL17U
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL17U
Temperature [K]
_diffrn.ambient_temp
100.00
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-10-03
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.5.0110)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
127.075 77.341 131.642 90.00 115.93 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.550
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.500 3.230 1.500
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.063 0.031 0.950
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.063 - 0.743
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.025 0.012 0.380
Total number of observations
_reflns.pdbx_number_measured_all
2610781 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
169683 35848 34669
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.4 99.1 95.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.4 7.5 7.2
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.999 0.805

Refinement
PDB entry ID
_entry.id
5BOB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-05-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.5 - 1.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1610 / 0.1892
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD