Data quality metrics extracted from 6bnb.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6BNB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-C
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-C
Temperature [K]
_diffrn.ambient_temp
100.0
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-10-19
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97241
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.12_2829)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 4 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
313.355 313.355 167.371 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97241 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
156.680
High resolution limit [Å]
_reflns.d_resolution_high
6.340
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.165
Rmeas
_reflns.pdbx_Rrim_I_all
0.172
Rpim
_reflns.pdbx_Rpim_I_all
0.047
  Total number of observations -
Total number unique
_reflns.number_obs
8992
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
15.30
Completeness [%]
_reflns.percent_possible_obs
98.1
Multiplicity
_reflns.pdbx_redundancy
25.4
CC(1/2)
_reflns.pdbx_CC_half
1.000

Refinement
PDB entry ID
_entry.id
6BNB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-11-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
147.6 - 6.343 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.3368 / 0.3805
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5FQD chain A/B;3MXF chain Å