Data quality metrics extracted from 8bmv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8BMV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALBA BEAMLINE XALOC
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALBA
Beamline
_diffrn_source.pdbx_synchrotron_beamline
XALOC
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-06-11
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97926
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
MOLREP (11.0 /22.07.2010/)
Refinement #1
_software.classification
PHENIX (1..20.1-4487)
Refinement #2
_software.classification
REFMAC (5.8.0135)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
32.581 124.322 57.201 90.00 99.33 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97926 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
124.320
High resolution limit [Å]
_reflns.d_resolution_high
1.950
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.055
Rmeas
_reflns.pdbx_Rrim_I_all
0.068
Rpim
_reflns.pdbx_Rpim_I_all
0.039
Total number of observations
_reflns.pdbx_number_measured_all
91788
Total number unique
_reflns.number_obs
31404
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
11.40
Completeness [%]
_reflns.percent_possible_obs
96.1
Multiplicity
_reflns.pdbx_redundancy
2.9
CC(1/2)
_reflns.pdbx_CC_half
0.998

Refinement
PDB entry ID
_entry.id
8BMV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-11-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.1 - 1.950 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1822 / 0.2310
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
AF2