Data quality metrics extracted from 7bmt.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7BMT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2013-04-24
Detector
_diffrn_detector.type
RIGAKU RAXIS HTC
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
SHELXDE
Refinement
_software.classification
REFMAC (5.8.0158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
78.877 78.877 36.960 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
19.130 19.130 1.490
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.470 8.040 1.470
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.042 0.026 0.147
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.043 0.027 0.150
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.006 0.004 0.028
Total number of observations
_reflns_shell.number_measured_all
- 6059 24175
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
20426 152 914
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
84.90 138.40 21.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.6 93.8 93.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
50.9 39.9 26.4
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 1.000 0.993

Refinement
PDB entry ID
_entry.id
7BMT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-01-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.1 - 1.470 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1406 / 0.1687
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD