Data quality metrics extracted from 9bkh.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9BKH at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-002
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-06-28
Detector
_diffrn_detector.type
DECTRIS PILATUS 200K
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.21_5207: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
75.332 75.332 139.794 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 1.700
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.670 1.670
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.055 0.545
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
17900 783
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
35.60 -
Completeness [%]
_reflns.percent_possible_obs
99.3 -
Multiplicity
_reflns.pdbx_redundancy
6.2 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
9BKH
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-04-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.7 - 1.670 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1873 / 0.2131
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given