Data quality metrics extracted from 6bjk.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6BJK at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SEALED TUBE
Source details
_diffrn_source.type
RIGAKU
Temperature [K]
_diffrn.ambient_temp
113
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2005-12-08
Detector
_diffrn_detector.type
RIGAKU RAXIS IV++
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction
_software.classification
CrystalClear
Data scaling
_software.classification
d*TREK (9.4SSI)
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.8.0155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
52.49 150.26 78.32 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
19.580 19.580 2.200
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.120 4.550 2.120
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.088 0.053 0.294
Rmeas
_reflns.pdbx_Rrim_I_all
0.088 - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
17135 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.10 21.20 3.90
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.3 87.5 98.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.7 4.9 4.6
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
6BJK
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-11-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.6 - 2.120 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1929 / 0.2400
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB entry 1LZ7