Data quality metrics extracted from 7bim.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7BIM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-09-18
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9795
Software
Data reduction
_software.classification
xia2 (0.5.48-g3279616-dials-1.3)
Data scaling
_software.classification
xia2 (0.5.48-g3279616-dials-1.3)
Phasing
_software.classification
Arcimboldo
Refinement
_software.classification
REFMAC (5.8.0258)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
71.21 128.08 71.45 90.00 110.67 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
66.850 66.910 1.670
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.640 4.450 1.640
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.074 0.029 1.429
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.080 0.031 1.545
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.031 0.012 0.583
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
146091 7331 7322
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.25 45.00 1.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.0 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.8 6.6 6.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.526

Refinement
PDB entry ID
_entry.id
7BIM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-01-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
66.8 - 1.640 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1823 / 0.2055
Structure solution method
_refine.pdbx_method_to_determine_struct
AB INITIO PHASING