Data quality metrics extracted from 3b9t.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3B9T at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 8.2.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
8.2.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2007-10-05
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97960
Software
Data collection
_software.classification
ADSC (Quantum)
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (Phil Evans; pre@mrc-lmb.cam.ac.uk)
Phasing
_software.classification
SOLVE (Tom Terwilliger; terwilliger@LANL.gov)
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement #1
_software.classification
REFMAC (5.2.0019; Murshudov, G.N.; ccp4@dl.ac.uk)
Refinement #2
_software.classification
PHENIX (P.D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
62.165 82.723 83.576 107.82 105.81 95.18
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97960 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.814 29.814 1.620
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.580 7.070 1.580
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.090 0.074 0.459
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 4436 27870
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
196551 2235 14334
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
7.20 8.40 1.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.8 97.8 94.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
1.9 2.0 1.9
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3B9T
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2007-11-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.8 - 1.580 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1380 / 0.1770
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD