Data quality metrics extracted from 7b5a.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7B5A at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
PETRA III, EMBL c/o DESY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
P13 (MX1)
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-11-30
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9762
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
REFMAC (5.8.0258)
Refinement
_software.classification
REFMAC (5.8.0258)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 63 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
131.485 131.485 189.523 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97620 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
113.870
High resolution limit [Å]
_reflns.d_resolution_high
1.970
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.200
Rmeas
_reflns.pdbx_Rrim_I_all
0.234
Rpim
_reflns.pdbx_Rpim_I_all
0.064
  Total number of observations -
Total number unique
_reflns.number_obs
68762
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
12.20
Completeness [%]
_reflns.percent_possible_obs
100.0
Multiplicity
_reflns.pdbx_redundancy
13.2
CC(1/2)
_reflns.pdbx_CC_half
0.998

Refinement
PDB entry ID
_entry.id
7B5A
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-12-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
97.8 - 1.970 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1668 / 0.2092
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6G48