Data quality metrics extracted from 9b47.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9B47 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 8.3.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
8.3.1
Temperature [K]
_diffrn.ambient_temp
173
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-12-04
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.116
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.20.1_4487)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
174.23 174.23 171.53 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.11600 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
113.300
High resolution limit [Å]
_reflns.d_resolution_high
3.700
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.140
Rmeas
_reflns.pdbx_Rrim_I_all
0.153
Rpim
_reflns.pdbx_Rpim_I_all
0.063
  Total number of observations -
Total number unique
_reflns.number_obs
20706
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.41
Completeness [%]
_reflns.percent_possible_obs
99.3
Multiplicity
_reflns.pdbx_redundancy
5.9
CC(1/2)
_reflns.pdbx_CC_half
0.998

Refinement
PDB entry ID
_entry.id
9B47
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-03-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
113.3 - 3.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2247 / 0.2565
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given